PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3B_8B0D448D8.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 255aa    MW: 27776.7 Da    PI: 7.2729
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3B_8B0D448D8.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.94.8e-2449110259
                           --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
                  WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                           +Dg++WrKYGqK+++g+ fpr YYrCt++   gC++ k+ve+  + dp ++ ++Y+++H+++
  Traes_3B_8B0D448D8.1  49 HDGFQWRKYGQKVIRGNAFPRCYYRCTYHqdhGCSASKHVEQHnSADPPLFRVVYTNDHTCS 110
                           7***************************98999*******986157**************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-2433110IPR003657WRKY domain
SuperFamilySSF1182908.37E-2241110IPR003657WRKY domain
SMARTSM007744.4E-3448111IPR003657WRKY domain
PROSITE profilePS5081119.65750107IPR003657WRKY domain
PfamPF031065.9E-2450109IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MRGSNMLSSS GSNKRALQQD CSGGSHAQEH TKRKSRIGMR TDYTYAPYHD GFQWRKYGQK  60
VIRGNAFPRC YYRCTYHQDH GCSASKHVEQ HNSADPPLFR VVYTNDHTCS GAAASASDYM  120
ASSMQIQQIA DASLRKADTE AERPPRPQQP RSGGSYAAAI KEEKDAIVSS LLTVIRGSCD  180
VVKSDTAHEG YSSASLATNC YAMSSPSVAG GSREGSSSSS VSPVVLPAPD DMGLGLDFMV  240
ESHWFEPLDL GWFVE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ8063911e-173JQ806391.1 Hordeum vulgare WRKY transcript factor 53 (WRKY53) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010233534.11e-104PREDICTED: probable WRKY transcription factor 38
TrEMBLM7YFN41e-167M7YFN4_TRIUA; Putative WRKY transcription factor 38
STRINGMLOC_6114.11e-146(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118143139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.12e-18WRKY DNA-binding protein 55